Publications

Found 8 results
Author Title [ Type(Desc)] Year
Filters: Author is Rurainski, Alexander  [Clear All Filters]
Journal Article
A. Katharina Dehof, Rurainski, A., Bui, Q. Bao Anh, Böcker, S., Lenhof, H. - P., and Hildebrandt, A., Automated bond order assignment as an optimization problem., Bioinformatics, vol. 27, no. 5, pp. 619-25, 2011.
A. Hildebrandt, Dehof, A. Katharina, Rurainski, A., Bertsch, A., Schumann, M., Toussaint, N. C., Moll, A., Stöckel, D., Nickels, S., Mueller, S. C., Lenhof, H. - P., and Kohlbacher, O., BALL-biochemical algorithms library 1.3., BMC Bioinformatics, vol. 11, p. 531, 2010.
A. Rurainski, Hildebrandt, A., and Lenhof, H. - P., A consensus line search algorithm for molecular potential energy functions., Journal of Computational Chemistry, vol. 30, no. 9, pp. 1499-509, 2009.
C. Backes, Rurainski, A., Klau, G. W., Müller, O., Stöckel, D., Gerasch, A., Küntzer, J., Maisel, D., Ludwig, N., Hein, M., Keller, A., Burtscher, H., Kaufmann, M., Meese, E., and Lenhof, H. - P., An integer linear programming approach for finding deregulated subgraphs in regulatory networks., Nucleic Acids Research, vol. 40, no. 6, p. e43, 2012.
D. Stöckel, Müller, O., Kehl, T., Gerasch, A., Backes, C., Rurainski, A., Keller, A., Kaufmann, M., and Lenhof, H. - P., NetworkTrail--a web service for identifying and visualizing deregulated subnetworks., Bioinformatics, vol. 29, no. 13, pp. 1702-3, 2013.
J. Fuhrmann, Rurainski, A., Lenhof, H. - P., and Neumann, D., A new Lamarckian genetic algorithm for flexible ligand-receptor docking., Journal of Computational Chemistry, vol. 31, no. 9, pp. 1911-8, 2010.
J. Fuhrmann, Rurainski, A., Lenhof, H. - P., and Neumann, D., A new method for the gradient-based optimization of molecular complexes., Journal of Computational Chemistry, vol. 30, no. 9, pp. 1371-8, 2009.
S. Sebastian Raesch, Tenzer, S., Storck, W., Rurainski, A., Selzer, D., Ruge, C. Arnold, Perez-Gil, J., Schaefer, U. Friedrich, and Lehr, C. - M., Proteomic and Lipidomic Analysis of Nanoparticle Corona upon Contact with Lung Surfactant Reveals Differences in Protein, but Not Lipid Composition, ACS Nano, vol. 9, no. 12, pp. 11872 - 11885, 2015.